STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM187AFamily with sequence similarity 187 member A. (421 aa)    
Predicted Functional Partners:
HIGD1B
HIG1 hypoxia inducible domain family member 1B.
      
 0.556
rps27a
Ubiquitin-like domain-containing protein.
    
 0.528
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.491
H9GRS7_ANOCA
Ubiquitin-like domain-containing protein.
    
 0.483
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.483
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.455
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.435
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.414
H9GD36_ANOCA
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.414
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.414
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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