STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THY1Thy-1 cell surface antigen. (161 aa)    
Predicted Functional Partners:
SYT2
Synaptotagmin 2.
      
 0.660
LOC103278533
Uncharacterized protein.
      
 0.660
PSEN1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.587
H9GMH8_ANOCA
ZP domain-containing protein.
      
 0.575
cd34
Uncharacterized protein.
      
 0.567
G1KCR2_ANOCA
Link domain-containing protein.
      
 0.561
PTPRC
Protein tyrosine phosphatase receptor type C.
      
 0.561
nt5e
5_nucleotid_C domain-containing protein.
      
 0.561
cd79a
Ig-like domain-containing protein.
   
  
 0.554
cd19
Ig-like domain-containing protein.
      
 0.548
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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