STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM20Translocase of outer mitochondrial membrane 20. (148 aa)    
Predicted Functional Partners:
TOMM40
Translocase of outer mitochondrial membrane 40.
   
 0.956
TOMM22
Translocase of outer mitochondrial membrane 22.
   
 0.940
TOMM70
Translocase of outer mitochondrial membrane 70.
   
 0.934
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 0.878
NECTIN2
Nectin cell adhesion molecule 2.
   
 0.780
Usp30
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.765
VDAC2
Voltage dependent anion channel 2.
   
 0.705
VDAC1
Voltage dependent anion channel 1.
   
 0.696
VDAC3
Voltage dependent anion channel 3.
   
 0.696
LOC100560655
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
  
 0.609
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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