STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R4GCA3_ANOCAUncharacterized protein. (490 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.656
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.651
G1KCR2_ANOCA
Link domain-containing protein.
   
 0.553
LOC100551718
NTR domain-containing protein.
    
 0.529
LOC103277700
NTR domain-containing protein.
    
 0.529
LOC103277701
NTR domain-containing protein.
    
 0.529
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.526
KITLG
Kit ligand; Ligand for the receptor-type protein-tyrosine kinase KIT. Plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. Belongs to the SCF family.
     
 0.478
SPP1
Secreted phosphoprotein 1.
     
 0.455
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.422
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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