STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBNL1Muscleblind like splicing regulator 1. (412 aa)    
Predicted Functional Partners:
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 
 0.710
CELF1
CUGBP Elav-like family member 1.
   
 
 0.691
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
  
 0.673
KHSRP
KH-type splicing regulatory protein.
   
  
 0.666
ppan
Brix domain-containing protein.
      
 0.657
TRERF1
Transcriptional regulating factor 1.
      
 0.656
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
    
 
 0.651
RBFOX1
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.
    
 
 0.611
hnrnpl
Uncharacterized protein.
   
 
 0.585
QKI
QKI, KH domain containing RNA binding.
   
 
 0.576
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.