STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ92401.1Protein of unknown function. (223 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
    0.859
SDZ82297.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.764
SEA46338.1
uroporphyrinogen-III synthase.
  
     0.761
SDZ73655.1
Hypothetical protein.
  
     0.750
SDZ92599.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.749
SEA66006.1
Putative negative regulator of RcsB-dependent stress response.
  
     0.749
SDZ72694.1
Protein of unknown function.
  
     0.746
SEA09299.1
RNA polymerase Rpb6.
  
     0.722
SDZ99021.1
Type I restriction enzyme R protein N terminus (HSDR_N).
  
     0.700
SDZ84604.1
Rod shape-determining protein MreD.
  
     0.692
Your Current Organism:
Bizionia paragorgiae
NCBI taxonomy Id: 283786
Other names: B. paragorgiae, Bizionia paragorgiae Nedashkovskaya et al. 2005, DSM 23842, KCTC 12304, KMM 6029, LMG 22571, LMG:22571
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