STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA05729.1MoxR-like ATPase. (327 aa)    
Predicted Functional Partners:
SEA05848.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.841
SEA05791.1
Protein of unknown function.
 
    0.835
SEA05758.1
Protein of unknown function.
 
    0.826
SEA05706.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.824
SEA05818.1
Hypothetical protein.
 
    0.822
SEA05879.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.687
SEA05914.1
Uncharacterized membrane protein YeiH.
  
    0.567
SEA16800.1
Protein of unknown function DUF58.
  
 0.554
SEA05674.1
Outer membrane protein OmpA.
       0.436
SEA16751.1
Ca-activated chloride channel family protein.
 
 
 0.408
Your Current Organism:
Bizionia paragorgiae
NCBI taxonomy Id: 283786
Other names: B. paragorgiae, Bizionia paragorgiae Nedashkovskaya et al. 2005, DSM 23842, KCTC 12304, KMM 6029, LMG 22571, LMG:22571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.