STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA23813.1Alanine or glycine:cation symporter, AGCS family. (689 aa)    
Predicted Functional Partners:
SEA23839.1
Competence protein ComEA helix-hairpin-helix repeat region.
       0.781
SEA23866.1
Acyl-CoA dehydrogenase.
  
    0.692
SEA23761.1
Phage shock protein C (PspC) family protein.
       0.561
SEA23788.1
Voltage-gated potassium channel.
       0.559
SEA23737.1
Protein of unknown function.
       0.435
Your Current Organism:
Bizionia paragorgiae
NCBI taxonomy Id: 283786
Other names: B. paragorgiae, Bizionia paragorgiae Nedashkovskaya et al. 2005, DSM 23842, KCTC 12304, KMM 6029, LMG 22571, LMG:22571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.