Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ72548.1 | SEA20987.1 | SAMN04487990_1011 | SAMN04487990_10872 | Hypothetical protein. | Anthranilate synthase component 2. | 0.783 |
SDZ72548.1 | SEA21015.1 | SAMN04487990_1011 | SAMN04487990_10873 | Hypothetical protein. | Anthranilate synthase component 1. | 0.778 |
SDZ72548.1 | SEA42970.1 | SAMN04487990_1011 | SAMN04487990_11332 | Hypothetical protein. | Para-aminobenzoate synthetase component 1. | 0.777 |
SDZ72548.1 | trpA | SAMN04487990_1011 | SAMN04487990_10867 | Hypothetical protein. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.772 |
SDZ72548.1 | trpB | SAMN04487990_1011 | SAMN04487990_10868 | Hypothetical protein. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.743 |
SDZ72548.1 | trpC | SAMN04487990_1011 | SAMN04487990_10870 | Hypothetical protein. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.779 |
SDZ72548.1 | trpD | SAMN04487990_1011 | SAMN04487990_10871 | Hypothetical protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.772 |
SDZ72548.1 | trpF | SAMN04487990_1011 | SAMN04487990_10869 | Hypothetical protein. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.607 |
SEA20987.1 | SDZ72548.1 | SAMN04487990_10872 | SAMN04487990_1011 | Anthranilate synthase component 2. | Hypothetical protein. | 0.783 |
SEA20987.1 | SEA21015.1 | SAMN04487990_10872 | SAMN04487990_10873 | Anthranilate synthase component 2. | Anthranilate synthase component 1. | 0.999 |
SEA20987.1 | SEA42970.1 | SAMN04487990_10872 | SAMN04487990_11332 | Anthranilate synthase component 2. | Para-aminobenzoate synthetase component 1. | 0.999 |
SEA20987.1 | trpA | SAMN04487990_10872 | SAMN04487990_10867 | Anthranilate synthase component 2. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.987 |
SEA20987.1 | trpB | SAMN04487990_10872 | SAMN04487990_10868 | Anthranilate synthase component 2. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.999 |
SEA20987.1 | trpC | SAMN04487990_10872 | SAMN04487990_10870 | Anthranilate synthase component 2. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.999 |
SEA20987.1 | trpD | SAMN04487990_10872 | SAMN04487990_10871 | Anthranilate synthase component 2. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
SEA20987.1 | trpF | SAMN04487990_10872 | SAMN04487990_10869 | Anthranilate synthase component 2. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.976 |
SEA21015.1 | SDZ72548.1 | SAMN04487990_10873 | SAMN04487990_1011 | Anthranilate synthase component 1. | Hypothetical protein. | 0.778 |
SEA21015.1 | SEA20987.1 | SAMN04487990_10873 | SAMN04487990_10872 | Anthranilate synthase component 1. | Anthranilate synthase component 2. | 0.999 |
SEA21015.1 | trpA | SAMN04487990_10873 | SAMN04487990_10867 | Anthranilate synthase component 1. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.957 |
SEA21015.1 | trpB | SAMN04487990_10873 | SAMN04487990_10868 | Anthranilate synthase component 1. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.998 |
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