STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA19231.1Outer membrane transport energization protein ExbB. (233 aa)    
Predicted Functional Partners:
SEA19257.1
Outer membrane transport energization protein ExbD.
 
 
 0.989
SEA19285.1
Outer membrane transport energization protein TonB.
 
 
 0.926
SEA41027.1
Biopolymer transport protein ExbD.
 
 
 0.911
SEA41008.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.910
SEA51959.1
Protein TonB.
 
 
 0.751
SEA29014.1
TonB protein C-terminal.
 
 
 0.741
SEA19313.1
Dihydrofolate synthase / folylpolyglutamate synthase.
     
 0.725
SEA60839.1
TonB protein C-terminal.
  
 
 0.707
SEA46596.1
TonB family C-terminal domain-containing protein.
  
 
 0.672
SEA19206.1
Sodium/proton antiporter, NhaD family.
       0.658
Your Current Organism:
Bizionia paragorgiae
NCBI taxonomy Id: 283786
Other names: B. paragorgiae, Bizionia paragorgiae Nedashkovskaya et al. 2005, DSM 23842, KCTC 12304, KMM 6029, LMG 22571, LMG:22571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.