STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA49669.1Hypothetical protein. (253 aa)    
Predicted Functional Partners:
SEA49640.1
Hypothetical protein.
 
    
0.842
SEA46596.1
TonB family C-terminal domain-containing protein.
  
   0.687
SEA49348.1
Hypothetical protein.
  
     0.656
SDZ78748.1
Hypothetical protein.
  
     0.646
SDZ74033.1
Hypothetical protein.
  
     0.645
SDZ94038.1
Hypothetical protein.
  
     0.642
SDZ80715.1
Hypothetical protein.
  
     0.637
SEA49689.1
Hypothetical protein.
       0.636
SDZ95181.1
Hypothetical protein.
  
     0.632
SEA40344.1
Hypothetical protein.
  
     0.628
Your Current Organism:
Bizionia paragorgiae
NCBI taxonomy Id: 283786
Other names: B. paragorgiae, Bizionia paragorgiae Nedashkovskaya et al. 2005, DSM 23842, KCTC 12304, KMM 6029, LMG 22571, LMG:22571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.