STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA60741.1Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein. (63 aa)    
Predicted Functional Partners:
SEA60714.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
     0.926
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.696
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.675
SEA65534.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.608
SEA60796.1
Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family.
       0.570
SEA31932.1
4Fe-4S dicluster domain-containing protein.
   
  
 0.563
SEA36298.1
4Fe-4S binding domain-containing protein.
   
  
 0.563
SEA00432.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.434
SEA33810.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.434
Your Current Organism:
Bizionia paragorgiae
NCBI taxonomy Id: 283786
Other names: B. paragorgiae, Bizionia paragorgiae Nedashkovskaya et al. 2005, DSM 23842, KCTC 12304, KMM 6029, LMG 22571, LMG:22571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.