STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7T347_CAPTEHelicase ATP-binding domain-containing protein. (1021 aa)    
Predicted Functional Partners:
R7UWR4_CAPTE
RING-type domain-containing protein.
   
 0.971
R7T9A8_CAPTE
Uncharacterized protein.
   
 0.961
R7THV1_CAPTE
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
    
 0.942
R7VGS7_CAPTE
Uncharacterized protein.
   
 0.940
R7VIH6_CAPTE
Uncharacterized protein.
    
 0.940
R7VKJ3_CAPTE
General transcription factor IIH subunit.
    
 0.938
R7VEY6_CAPTE
Uncharacterized protein.
    
 0.936
R7TCL4_CAPTE
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.932
R7UPP9_CAPTE
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.928
R7TSH5_CAPTE
FHA domain-containing protein.
    
 0.924
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.