STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7T641_CAPTEBromo domain-containing protein. (87 aa)    
Predicted Functional Partners:
R7UEB7_CAPTE
Uncharacterized protein.
   
 0.988
R7UQ39_CAPTE
Uncharacterized protein.
   
 0.987
R7UYT3_CAPTE
HMG box domain-containing protein.
   
 0.987
R7TNP1_CAPTE
PHD-type domain-containing protein.
    
 0.984
R7UQR0_CAPTE
Uncharacterized protein; Belongs to the actin family.
   
 0.966
R7TBT3_CAPTE
C2H2-type domain-containing protein.
   
 0.954
R7V7U7_CAPTE
Uncharacterized protein.
   
 0.954
R7TTF0_CAPTE
Uncharacterized protein.
    
 0.952
R7U557_CAPTE
HMG box domain-containing protein.
   
 0.952
R7V7V5_CAPTE
Uncharacterized protein.
    
 0.952
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.