STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TAT7_CAPTEJmjC domain-containing protein. (138 aa)    
Predicted Functional Partners:
R7TK82_CAPTE
PAS domain-containing protein.
    
 0.683
R7U609_CAPTE
Uncharacterized protein.
    
 0.683
R7VET3_CAPTE
Uncharacterized protein.
    
 0.683
R7VHC1_CAPTE
BHLH domain-containing protein.
    
 0.683
R7T9W1_CAPTE
JmjC domain-containing protein.
  
     0.477
R7U5V6_CAPTE
JmjC domain-containing protein.
  
     0.468
R7V909_CAPTE
TYW3 domain-containing protein.
  
   
 0.467
N1PBB7_CAPTE
Flavodoxin-like domain-containing protein.
  
   
 0.455
R7UHH1_CAPTE
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.404
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.