STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TBY2_CAPTEUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (411 aa)    
Predicted Functional Partners:
R7VE99_CAPTE
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.883
R7V235_CAPTE
Tyrosine--tRNA ligase.
  
 
 0.810
R7U9H6_CAPTE
tRNA-binding domain-containing protein.
  
 
 0.781
R7U0I8_CAPTE
Ribosomal_S10 domain-containing protein.
  
 
 0.778
R7TZQ2_CAPTE
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.768
R7U0P3_CAPTE
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.768
R7UBG1_CAPTE
IGPS domain-containing protein.
  
  
 0.749
R7U613_CAPTE
Uncharacterized protein.
  
 
 0.733
R7T4H4_CAPTE
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.732
R7V0E5_CAPTE
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.697
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.