STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TC21_CAPTEBHLH domain-containing protein. (67 aa)    
Predicted Functional Partners:
R7V7T6_CAPTE
BHLH domain-containing protein.
    
 0.820
R7V4S2_CAPTE
LID domain-containing protein.
    
 0.686
R7VDT8_CAPTE
LID domain-containing protein.
    
 0.686
R7T4N9_CAPTE
Transcription factor Runt.
    
 0.616
R7U9H9_CAPTE
Homeobox domain-containing protein.
  
 
  0.556
R7T3T5_CAPTE
Homeobox domain-containing protein.
  
 
  0.549
R7U018_CAPTE
ETS domain-containing protein.
  
 
 0.536
R7TRW0_CAPTE
ETS domain-containing protein.
  
 
 0.504
R7URX2_CAPTE
ETS domain-containing protein.
  
     0.494
R7URY5_CAPTE
Nuclear receptor domain-containing protein.
  
 
   0.471
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.