STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TC87_CAPTEtRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (440 aa)    
Predicted Functional Partners:
R7U1B3_CAPTE
Flavokinase domain-containing protein.
     
 0.861
R7V3N9_CAPTE
Uncharacterized protein.
   
 
 0.827
R7VJP6_CAPTE
Uncharacterized protein.
   
 
 0.827
R7TAB2_CAPTE
MoCF_biosynth domain-containing protein.
 
    
 0.792
R7UB05_CAPTE
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.736
R7V909_CAPTE
TYW3 domain-containing protein.
  
 
 0.728
N1PBB7_CAPTE
Flavodoxin-like domain-containing protein.
   
 
 0.678
R7TX32_CAPTE
CPSF_A domain-containing protein.
   
 
  0.668
R7TX12_CAPTE
tRNA (guanine(46)-N(7))-methyltransferase.
   
  
 0.628
R7TZD9_CAPTE
SAM-dependent MTase TRM10-type domain-containing protein.
   
  
 0.620
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (30%) [HD]