STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TPC5_CAPTEUncharacterized protein. (254 aa)    
Predicted Functional Partners:
R7V5U9_CAPTE
Uncharacterized protein.
  
   0.975
R7T9H3_CAPTE
Tr-type G domain-containing protein.
  
 
 0.973
R7U554_CAPTE
Ubiquitin-like domain-containing protein.
   
 
 0.957
R7UR19_CAPTE
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.955
R7UV50_CAPTE
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.895
R7VKN7_CAPTE
Uncharacterized protein.
   
 
 0.892
R7VG95_CAPTE
Uncharacterized protein.
  
 
 0.884
R7VD60_CAPTE
Ribosomal_L18_c domain-containing protein.
   
 
 0.878
R7V521_CAPTE
Uncharacterized protein.
   
 
 0.874
R7TGE7_CAPTE
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.868
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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