STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TQR4_CAPTEUncharacterized protein. (879 aa)    
Predicted Functional Partners:
R7TLT7_CAPTE
N-acetyltransferase domain-containing protein.
   
 0.985
R7VDF0_CAPTE
SGF29 C-terminal domain-containing protein.
   
 0.983
R7TJI0_CAPTE
Uncharacterized protein.
    
 0.980
R7VHD4_CAPTE
CBFD_NFYB_HMF domain-containing protein.
    
 0.969
R7UMZ5_CAPTE
Transcriptional adapter.
    
 0.965
R7UMQ4_CAPTE
Uncharacterized protein.
   
 0.948
R7VM09_CAPTE
Uncharacterized protein.
   
 0.945
R7U0Q6_CAPTE
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.918
R7UGF0_CAPTE
Uncharacterized protein.
    
 0.913
CAPTEDRAFT_544
TFIIF_beta domain-containing protein.
   
 0.905
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (28%) [HD]