STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TR52_CAPTEUncharacterized protein. (200 aa)    
Predicted Functional Partners:
R7TRA6_CAPTE
WD_REPEATS_REGION domain-containing protein.
   
 0.997
R7U3M2_CAPTE
Uncharacterized protein.
   
 0.996
R7VJJ3_CAPTE
Death domain-containing protein.
    
 0.996
R7TYD9_CAPTE
WD_REPEATS_REGION domain-containing protein.
    
 0.989
R7TK89_CAPTE
Uncharacterized protein.
   
 0.987
R7U5S0_CAPTE
Uncharacterized protein.
   
 0.976
R7U6W0_CAPTE
THOC2_N domain-containing protein.
   
 0.976
R7U5S6_CAPTE
Uncharacterized protein.
   
 0.964
R7VHJ2_CAPTE
Uncharacterized protein.
   
 0.964
R7US76_CAPTE
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
   
 
 0.923
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.