STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TRD1_CAPTEUncharacterized protein; Belongs to the DapA family. (306 aa)    
Predicted Functional Partners:
R7UGF7_CAPTE
MR_MLE domain-containing protein.
     
 0.787
R7TCS0_CAPTE
MR_MLE domain-containing protein.
  
 
 0.772
R7VEL1_CAPTE
Aspartate aminotransferase.
   
 0.747
R7UVY7_CAPTE
Uncharacterized protein.
   
 
 0.730
R7V5M8_CAPTE
Uncharacterized protein.
    
 0.729
R7VDL1_CAPTE
Uncharacterized protein.
    
 0.729
R7UZG5_CAPTE
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
    
  0.697
R7TFD6_CAPTE
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.688
R7TPS8_CAPTE
Serine--pyruvate aminotransferase.
   
 
 0.688
R7UG84_CAPTE
Serine--pyruvate aminotransferase.
   
 
 0.688
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.