STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TTM8_CAPTEUncharacterized protein. (992 aa)    
Predicted Functional Partners:
R7ULA6_CAPTE
Uncharacterized protein.
   
 
 0.930
R7UVV5_CAPTE
UBA domain-containing protein.
   
 
 0.930
R7U554_CAPTE
Ubiquitin-like domain-containing protein.
   
   0.861
R7ULP6_CAPTE
MPN domain-containing protein.
   
 
 0.808
R7V6B0_CAPTE
Uncharacterized protein.
   
 
 0.801
R7TLF0_CAPTE
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 
 0.796
R7TGU4_CAPTE
Ubiquitin-like domain-containing protein.
   
 
 0.750
R7VCT5_CAPTE
Uncharacterized protein.
   
 
 0.750
R7TJR2_CAPTE
Uncharacterized protein.
   
 
 0.748
R7TQV3_CAPTE
Ubiquitin-like domain-containing protein.
   
 
 0.748
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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