STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TUI1_CAPTEArchease domain-containing protein. (111 aa)    
Predicted Functional Partners:
R7UZ55_CAPTE
Uncharacterized protein.
  
 0.871
R7V5G5_CAPTE
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
  
 0.871
R7TGK0_CAPTE
Uncharacterized protein.
  
 0.857
R7TQW1_CAPTE
eRF1_1 domain-containing protein.
  
    0.793
R7V7S5_CAPTE
Uncharacterized protein.
     
 0.716
R7TJ67_CAPTE
AlbA_2 domain-containing protein.
     
 0.652
R7VLV1_CAPTE
Uncharacterized protein.
     
 0.609
R7TNG9_CAPTE
Uncharacterized protein.
     
 0.588
R7UHL4_CAPTE
Formyl_trans_N domain-containing protein.
    
  0.405
R7V1B8_CAPTE
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.405
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.