STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TUU8_CAPTERNA_GG_bind domain-containing protein. (422 aa)    
Predicted Functional Partners:
R7TRZ9_CAPTE
Nuclear cap-binding protein subunit 2.
   
 0.981
R7TKU7_CAPTE
DUF4187 domain-containing protein.
   
 0.952
R7TUE4_CAPTE
MIF4G domain-containing protein.
   
 0.934
R7TH63_CAPTE
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
  0.795
R7TK29_CAPTE
Uncharacterized protein.
   
 0.720
R7UQ15_CAPTE
CID domain-containing protein.
   
 0.720
R7T5K9_CAPTE
Uncharacterized protein.
    
   0.715
R7VI22_CAPTE
Uncharacterized protein.
   
 
  0.689
R7TFF4_CAPTE
Uncharacterized protein.
    
  0.657
R7U549_CAPTE
Uncharacterized protein.
    
  0.657
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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