STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TVL0_CAPTEUncharacterized protein. (658 aa)    
Predicted Functional Partners:
R7TJF4_CAPTE
RING-type domain-containing protein.
    
 
 0.565
MED16
Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
  
 0.546
R7UJT6_CAPTE
EMC1_C domain-containing protein.
      
 0.512
R7TRE3_CAPTE
HTTM domain-containing protein.
      
 0.511
R7UWI6_CAPTE
Uncharacterized protein.
      
 0.511
R7URE5_CAPTE
Uncharacterized protein.
      
 0.491
R7UA52_CAPTE
PAW domain-containing protein.
      
 0.489
R7TL17_CAPTE
Uncharacterized protein.
      
 0.473
R7UDR3_CAPTE
Peptidase_M28 domain-containing protein.
      
 0.454
R7VJ66_CAPTE
Uncharacterized protein.
      
 0.440
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.