STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7TZ49_CAPTEFSH1 domain-containing protein. (276 aa)    
Predicted Functional Partners:
N1PB55_CAPTE
Uncharacterized protein.
     
 0.771
R7V2Q2_CAPTE
Thymidylat_synt domain-containing protein.
     
 0.771
R7U057_CAPTE
DFP domain-containing protein.
     
 0.664
R7UK12_CAPTE
Uncharacterized protein; Belongs to the dihydrofolate reductase family.
   
 
  0.578
R7UI73_CAPTE
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
  0.577
R7TD77_CAPTE
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
   
  
 0.513
R7UKA3_CAPTE
CFAP91 domain-containing protein.
      
 0.446
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.