STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7U1B9_CAPTEtRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (497 aa)    
Predicted Functional Partners:
R7TWV5_CAPTE
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
R7TE43_CAPTE
Ribosomal_L7Ae domain-containing protein.
   
 0.995
R7U4Y7_CAPTE
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.995
R7UHZ6_CAPTE
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.994
R7T5T5_CAPTE
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.993
R7U7L1_CAPTE
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.993
R7UZP6_CAPTE
Uncharacterized protein.
   
 0.993
R7TDJ1_CAPTE
Uncharacterized protein.
   
 0.992
R7UZG5_CAPTE
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.992
R7VD60_CAPTE
Ribosomal_L18_c domain-containing protein.
  
 0.992
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.