STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7U1V8_CAPTEBTB domain-containing protein. (122 aa)    
Predicted Functional Partners:
R7T491_CAPTE
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.692
R7UNK8_CAPTE
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.692
R7UY52_CAPTE
RING-type domain-containing protein.
    
  0.619
R7TMN0_CAPTE
UBX domain-containing protein.
    
  0.608
R7T999_CAPTE
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.574
R7UM85_CAPTE
Uncharacterized protein.
    
  0.571
R7TP21_CAPTE
Uncharacterized protein.
   
   0.569
R7T3Y2_CAPTE
HORMA domain-containing protein.
    
   0.567
R7TJS4_CAPTE
TPR_REGION domain-containing protein.
    
  0.520
R7UUJ8_CAPTE
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
  0.515
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.