STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7U2V7_CAPTEImportin subunit alpha; Belongs to the importin alpha family. (532 aa)    
Predicted Functional Partners:
R7TIQ2_CAPTE
Importin N-terminal domain-containing protein.
   
 0.981
R7TZ80_CAPTE
Uncharacterized protein.
   
 
 0.952
R7UWI9_CAPTE
ULP_PROTEASE domain-containing protein.
    
 
 0.929
R7TUE4_CAPTE
MIF4G domain-containing protein.
   
 
 0.928
R7TRZ9_CAPTE
Nuclear cap-binding protein subunit 2.
   
 
 0.924
R7TH63_CAPTE
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.914
R7TS97_CAPTE
HRDC domain-containing protein.
    
   0.913
R7U680_CAPTE
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.913
R7TG70_CAPTE
Uncharacterized protein.
   
 
 0.900
R7UMR8_CAPTE
RHD domain-containing protein.
    
 0.881
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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