STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7U2W9_CAPTEHat1_N domain-containing protein. (361 aa)    
Predicted Functional Partners:
R7UAA1_CAPTE
WD_REPEATS_REGION domain-containing protein.
   
 0.987
R7U707_CAPTE
Uncharacterized protein.
   
 0.973
R7V1I8_CAPTE
Uncharacterized protein.
   
 
 0.945
R7T8N6_CAPTE
AAA_16 domain-containing protein.
    
 
 0.941
R7VC25_CAPTE
Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
    
 
 0.935
R7UBG7_CAPTE
Uncharacterized protein.
   
 
 0.934
R7UXG5_CAPTE
TPR_REGION domain-containing protein.
   
 
 0.932
R7U478_CAPTE
SHNi-TPR domain-containing protein.
   
 
 0.929
R7VGS8_CAPTE
Uncharacterized protein.
   
 
 0.925
R7T3W2_CAPTE
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.886
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.