STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7U4K8_CAPTEUncharacterized protein. (298 aa)    
Predicted Functional Partners:
R7TWV5_CAPTE
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.991
R7THG3_CAPTE
S10_plectin domain-containing protein.
   
 0.986
R7URC7_CAPTE
Ribosomal_S17_N domain-containing protein.
   
 0.986
R7UXC5_CAPTE
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.986
R7UYP0_CAPTE
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.981
R7VKP0_CAPTE
KH type-2 domain-containing protein.
   
 0.979
R7TLH2_CAPTE
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
  0.977
R7V1Q7_CAPTE
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.975
R7VKN7_CAPTE
Uncharacterized protein.
   
 0.972
R7T4S1_CAPTE
Ribosomal_S4 domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 0.971
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.