STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syt1Synaptotagmin 1 variant. (437 aa)    
Predicted Functional Partners:
R7VF32_CAPTE
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.991
R7T9N4_CAPTE
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.982
R7U3M3_CAPTE
Uncharacterized protein; Belongs to the Stoned B family.
   
 0.978
R7V271_CAPTE
V-SNARE coiled-coil homology domain-containing protein.
    
 0.969
R7VJK0_CAPTE
MFS domain-containing protein.
     
 0.950
R7TD52_CAPTE
Uncharacterized protein.
   
 0.926
Syt4
Synaptotagmin 4.
   
0.918
R7USE1_CAPTE
ATP-grasp domain-containing protein.
   
 0.869
R7TCT7_CAPTE
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.863
R7U5B0_CAPTE
Uncharacterized protein.
   
 0.846
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.