STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UA53_CAPTEJmjC domain-containing protein. (380 aa)    
Predicted Functional Partners:
R7TQW1_CAPTE
eRF1_1 domain-containing protein.
    
 
 0.668
R7U9X0_CAPTE
Fe2OG dioxygenase domain-containing protein.
   
  
 0.521
R7UQ80_CAPTE
Uncharacterized protein.
   
  
 0.515
R7TJL9_CAPTE
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.511
R7UIJ2_CAPTE
JmjC domain-containing protein.
      
 0.511
R7TDZ1_CAPTE
JmjC domain-containing protein.
      
 0.509
R7UZT2_CAPTE
JmjC domain-containing protein.
      
 0.507
R7UTY6_CAPTE
Fe2OG dioxygenase domain-containing protein.
   
  
 0.506
R7UCC2_CAPTE
Fe2OG dioxygenase domain-containing protein.
      
 0.491
R7VK25_CAPTE
Uncharacterized protein.
   
  
 0.491
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.