STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UCC0_CAPTEFibulin-1; Belongs to the fibulin family. (850 aa)    
Predicted Functional Partners:
R7V398_CAPTE
Uncharacterized protein.
 
     
0.833
R7TJH1_CAPTE
Uncharacterized protein.
   
  0.763
R7ULG2_CAPTE
Roc domain-containing protein.
   
  0.763
R7VC02_CAPTE
Uncharacterized protein.
   
  0.763
R7TW63_CAPTE
Uncharacterized protein.
    
 0.747
R7U3M9_CAPTE
MAM domain-containing protein.
   
  0.724
R7V6W5_CAPTE
Integrin_B_tail domain-containing protein.
    
 0.604
R7TKQ6_CAPTE
FERM domain-containing protein.
    
 0.590
R7VM58_CAPTE
WD_REPEATS_REGION domain-containing protein.
    
  0.584
R7VL64_CAPTE
Uncharacterized protein.
    
  0.576
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.