STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UDT8_CAPTEUncharacterized protein. (492 aa)    
Predicted Functional Partners:
R7UJV8_CAPTE
Uncharacterized protein.
   
 0.966
R7V9R1_CAPTE
Uncharacterized protein.
   
 0.966
R7UKN7_CAPTE
Matrin-type domain-containing protein.
   
 
 0.961
R7VM22_CAPTE
LRRcap domain-containing protein.
    
 
 0.957
R7UMA6_CAPTE
PSP domain-containing protein.
   
 
 0.956
R7TX32_CAPTE
CPSF_A domain-containing protein.
    
 
 0.945
R7TMA3_CAPTE
Uncharacterized protein.
   
 
 0.943
R7V2G6_CAPTE
Uncharacterized protein.
   
 0.937
R7UDS5_CAPTE
Sm domain-containing protein.
   
   0.928
R7UC00_CAPTE
Uncharacterized protein.
    
 
 0.927
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.