STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UF84_CAPTEAmino acid transporter. (270 aa)    
Predicted Functional Partners:
R7U0R0_CAPTE
Amino acid transporter.
  
     0.535
R7U3X4_CAPTE
Uncharacterized protein.
  
     0.535
R7U6C8_CAPTE
Amino acid transporter.
  
     0.535
R7VG62_CAPTE
Amino acid transporter.
  
     0.535
R7VJ80_CAPTE
Amino acid transporter.
  
     0.535
R7TFS8_CAPTE
Amino acid transporter.
  
     0.534
R7TIK6_CAPTE
Amino acid transporter.
  
     0.533
R7UAD4_CAPTE
Amino acid transporter.
  
     0.533
R7VCC6_CAPTE
Amino acid transporter.
  
     0.531
R7VB21_CAPTE
Amino acid transporter.
  
     0.529
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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