STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UHS3_CAPTEKOG2701 domain-containing protein. (617 aa)    
Predicted Functional Partners:
R7UWA2_CAPTE
Uncharacterized protein.
    
 
 0.966
R7U9R6_CAPTE
COMM domain-containing protein.
    
 
 0.947
R7U272_CAPTE
COMM domain-containing protein.
    
 
 0.936
R7T530_CAPTE
COMM domain-containing protein.
   
 
 0.927
R7U800_CAPTE
COMM domain-containing protein.
    
 
 0.912
R7UL78_CAPTE
COMM domain-containing protein.
    
 
 0.909
R7TMZ6_CAPTE
COMM domain-containing protein.
    
 
 0.901
R7TLM3_CAPTE
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.898
R7U226_CAPTE
Uncharacterized protein.
    
 
 0.885
R7T6R0_CAPTE
Uncharacterized protein.
    
 
 0.864
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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