STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UI30_CAPTEBHLH domain-containing protein. (56 aa)    
Predicted Functional Partners:
R7V7T6_CAPTE
BHLH domain-containing protein.
    
 0.941
R7V4S2_CAPTE
LID domain-containing protein.
    
 0.686
R7VDT8_CAPTE
LID domain-containing protein.
    
 0.686
R7T4N9_CAPTE
Transcription factor Runt.
    
 0.616
R7T773_CAPTE
GATA-binding transcription factor A1.
   
 0.509
R7T9M5_CAPTE
GATA-binding transcription factor B1.
   
 0.508
R7U9H9_CAPTE
Homeobox domain-containing protein.
  
 
  0.508
R7USB9_CAPTE
GATA-binding transcription factor B2.
   
 0.508
R7UYM4_CAPTE
Uncharacterized protein.
   
 0.508
R7TTZ4_CAPTE
NK-like homeobox protein 3.
    
 
 0.497
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.