STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UI95_CAPTEUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (113 aa)    
Predicted Functional Partners:
R7VG07_CAPTE
Uncharacterized protein.
   
 0.972
R7UYN8_CAPTE
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
0.911
R7U554_CAPTE
Ubiquitin-like domain-containing protein.
   
 0.904
R7TZW7_CAPTE
Uncharacterized protein.
    
 0.870
R7TZL0_CAPTE
OTU domain-containing protein.
    
 0.860
R7V1B5_CAPTE
Ubiquitin-like domain-containing protein.
   
 0.857
R7V2S5_CAPTE
AN1-type domain-containing protein.
   
 0.857
R7TZ80_CAPTE
Uncharacterized protein.
   
 0.850
R7UUW2_CAPTE
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
    
 0.848
R7U3Z5_CAPTE
UBA_e1_C domain-containing protein.
   
 0.843
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.