STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UIQ7_CAPTEUncharacterized protein. (512 aa)    
Predicted Functional Partners:
R7VFE7_CAPTE
Uncharacterized protein.
    
 
 0.960
R7UVZ1_CAPTE
Uncharacterized protein.
   
 
 0.957
R7VGF2_CAPTE
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.702
R7TP81_CAPTE
FYVE-type domain-containing protein.
    
 
 0.634
R7TPH5_CAPTE
Diacylglycerol kinase.
    
 
 0.631
R7U6Y5_CAPTE
Rab-GAP TBC domain-containing protein.
    
 
 0.604
R7U4N4_CAPTE
PX domain-containing protein.
   
 
 0.601
R7TJM9_CAPTE
PX domain-containing protein.
    
 
 0.598
R7TLM3_CAPTE
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.598
R7V612_CAPTE
PX domain-containing protein.
    
 
 0.591
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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