STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UIX7_CAPTED-aminoacyl-tRNA deacylase. (179 aa)    
Predicted Functional Partners:
R7V3D9_CAPTE
Serine/threonine-protein phosphatase.
   
   0.585
R7V235_CAPTE
Tyrosine--tRNA ligase.
  
  
 0.580
R7TTD4_CAPTE
Tyrosine--tRNA ligase.
     
 0.529
R7UY61_CAPTE
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
 
 
    0.477
R7U308_CAPTE
N-acetyltransferase domain-containing protein.
      
 0.456
R7VKZ7_CAPTE
Uncharacterized protein.
     
 0.433
R7U3N8_CAPTE
Uncharacterized protein.
  
    0.403
R7UDC3_CAPTE
RelA_SpoT domain-containing protein.
  
    0.403
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.