STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UKE2_CAPTEPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (335 aa)    
Predicted Functional Partners:
R7UBK7_CAPTE
Telo_bind domain-containing protein.
    
 0.707
R7V6Q1_CAPTE
Erf4 domain-containing protein.
    
 0.707
R7TPY4_CAPTE
Uncharacterized protein.
    
  0.637
R7UC31_CAPTE
Uncharacterized protein.
    
  0.637
R7UM34_CAPTE
HTH_40 domain-containing protein.
    
  0.637
R7UR47_CAPTE
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.637
R7UXI7_CAPTE
PUA domain-containing protein.
    
 0.590
R7TSH5_CAPTE
FHA domain-containing protein.
    
  0.578
R7U5X9_CAPTE
AAA domain-containing protein.
     
 0.539
R7V8H6_CAPTE
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
     
 0.536
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.