STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7ULW1_CAPTEUncharacterized protein. (77 aa)    
Predicted Functional Partners:
R7V235_CAPTE
Tyrosine--tRNA ligase.
  
  
 0.580
R7VDF7_CAPTE
RRM domain-containing protein.
      
 0.453
R7V3D9_CAPTE
Serine/threonine-protein phosphatase.
   
   0.433
R7VKZ7_CAPTE
Uncharacterized protein.
     
 0.433
R7TTD4_CAPTE
Tyrosine--tRNA ligase.
     
 0.416
R7U3N8_CAPTE
Uncharacterized protein.
  
    0.403
R7UDC3_CAPTE
RelA_SpoT domain-containing protein.
  
    0.403
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.