STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UQI3_CAPTEProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (387 aa)    
Predicted Functional Partners:
R7TVA7_CAPTE
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.998
R7VJY5_CAPTE
RRP7 domain-containing protein.
   
 0.984
R7TVQ4_CAPTE
Nucleolar protein 6.
    
 0.983
R7TRP7_CAPTE
TPR_REGION domain-containing protein.
   
 0.954
R7U3A2_CAPTE
G-patch domain-containing protein.
    
 
 0.941
R7TLD8_CAPTE
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.933
R7UC76_CAPTE
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
   0.930
R7UGR5_CAPTE
S4 RNA-binding domain-containing protein.
   
   0.930
R7UJ90_CAPTE
MI domain-containing protein.
   
   0.930
R7UND5_CAPTE
Uncharacterized protein.
   
   0.930
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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