STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7URI4_CAPTETRAF-type domain-containing protein. (97 aa)    
Predicted Functional Partners:
R7U748_CAPTE
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.936
R7VEE8_CAPTE
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.926
R7TEJ4_CAPTE
Uncharacterized protein.
  
 0.921
R7T6F1_CAPTE
Nudix hydrolase domain-containing protein.
  
 
 0.897
R7UBA9_CAPTE
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.879
R7VLQ1_CAPTE
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.871
R7UT63_CAPTE
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.834
R7UBG1_CAPTE
IGPS domain-containing protein.
  
 
  0.824
R7TXR5_CAPTE
Uncharacterized protein.
   
 0.809
R7UM01_CAPTE
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.809
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.