STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UTF4_CAPTEUncharacterized protein. (511 aa)    
Predicted Functional Partners:
R7UVI9_CAPTE
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.984
R7T491_CAPTE
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.957
R7UY61_CAPTE
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 
 0.938
R7TED3_CAPTE
VWFA domain-containing protein.
    
 
 0.893
R7UIH1_CAPTE
CPSF_A domain-containing protein.
    
 
 0.869
R7UNK8_CAPTE
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.861
R7UG14_CAPTE
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.833
R7UY52_CAPTE
RING-type domain-containing protein.
    
 0.831
R7T6J5_CAPTE
RING-type domain-containing protein.
    
 0.730
R7UCR4_CAPTE
RING-type domain-containing protein.
    
 0.730
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.