STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UVV5_CAPTEUBA domain-containing protein. (335 aa)    
Predicted Functional Partners:
R7VCK5_CAPTE
Uncharacterized protein.
   
 0.994
R7U5F2_CAPTE
Uncharacterized protein.
   
 0.987
R7UA52_CAPTE
PAW domain-containing protein.
    
 0.986
R7U554_CAPTE
Ubiquitin-like domain-containing protein.
   
 0.985
R7TS54_CAPTE
VWFA domain-containing protein.
   
 0.982
R7TLF0_CAPTE
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 0.980
R7TXC7_CAPTE
Uncharacterized protein.
   
 0.971
R7V7S0_CAPTE
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.970
R7ULP6_CAPTE
MPN domain-containing protein.
   
 0.968
R7VBY0_CAPTE
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.965
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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