STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UVV8_CAPTEC2H2-type domain-containing protein. (227 aa)    
Predicted Functional Partners:
R7T4Q6_CAPTE
Uncharacterized protein.
   
 0.988
R7UAU1_CAPTE
VEFS-Box domain-containing protein.
    
 0.988
R7UC89_CAPTE
WD_REPEATS_REGION domain-containing protein.
    
 0.988
R7UAA1_CAPTE
WD_REPEATS_REGION domain-containing protein.
   
 0.987
R7U554_CAPTE
Ubiquitin-like domain-containing protein.
    
  0.933
R7VL49_CAPTE
PHD-type domain-containing protein.
    
 0.838
R7TJA7_CAPTE
Histone H2A; Belongs to the histone H2A family.
    
 0.819
R7TNM4_CAPTE
Histone H2A; Belongs to the histone H2A family.
    
 0.819
R7TTA3_CAPTE
Histone H2A; Belongs to the histone H2A family.
    
 0.819
R7TW75_CAPTE
Histone H2A; Belongs to the histone H2A family.
    
 0.819
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.