R7UXJ2_CAPTE protein (Capitella teleta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R7UXJ2_CAPTE

DUF4206 domain-containing protein. (772 aa)

Predicted Functional Partners:

R7UHE8_CAPTE

0.992

R7T955_CAPTE

0.965

R7UFF2_CAPTE

0.965

R7V5G0_CAPTE

0.930

R7TU23_CAPTE

0.795

R7T8Y6_CAPTE

0.659

R7T619_CAPTE

0.597

R7UXU6_CAPTE

0.581

R7TZ80_CAPTE

0.576

R7U9L5_CAPTE

0.567

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T619_CAPTE	R7T955_CAPTE	R7T619	R7T955	Uncharacterized protein.	Uncharacterized protein.	0.996
R7T619_CAPTE	R7TU23_CAPTE	R7T619	R7TU23	Uncharacterized protein.	Uncharacterized protein.	0.996
R7T619_CAPTE	R7UFF2_CAPTE	R7T619	R7UFF2	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.996
R7T619_CAPTE	R7UHE8_CAPTE	R7T619	R7UHE8	Uncharacterized protein.	Uncharacterized protein.	0.573
R7T619_CAPTE	R7UXJ2_CAPTE	R7T619	R7UXJ2	Uncharacterized protein.	DUF4206 domain-containing protein.	0.597
R7T8Y6_CAPTE	R7TZ80_CAPTE	R7T8Y6	R7TZ80	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.437
R7T8Y6_CAPTE	R7U9L5_CAPTE	R7T8Y6	R7U9L5	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	CNH domain-containing protein.	0.660
R7T8Y6_CAPTE	R7UXJ2_CAPTE	R7T8Y6	R7UXJ2	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	DUF4206 domain-containing protein.	0.659
R7T8Y6_CAPTE	R7UXU6_CAPTE	R7T8Y6	R7UXU6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	CNH domain-containing protein.	0.587
R7T8Y6_CAPTE	R7V5G0_CAPTE	R7T8Y6	R7V5G0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.604
R7T955_CAPTE	R7T619_CAPTE	R7T955	R7T619	Uncharacterized protein.	Uncharacterized protein.	0.996
R7T955_CAPTE	R7TU23_CAPTE	R7T955	R7TU23	Uncharacterized protein.	Uncharacterized protein.	0.998
R7T955_CAPTE	R7UFF2_CAPTE	R7T955	R7UFF2	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.998
R7T955_CAPTE	R7UHE8_CAPTE	R7T955	R7UHE8	Uncharacterized protein.	Uncharacterized protein.	0.996
R7T955_CAPTE	R7UXJ2_CAPTE	R7T955	R7UXJ2	Uncharacterized protein.	DUF4206 domain-containing protein.	0.965
R7TU23_CAPTE	R7T619_CAPTE	R7TU23	R7T619	Uncharacterized protein.	Uncharacterized protein.	0.996
R7TU23_CAPTE	R7T955_CAPTE	R7TU23	R7T955	Uncharacterized protein.	Uncharacterized protein.	0.998
R7TU23_CAPTE	R7UFF2_CAPTE	R7TU23	R7UFF2	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.998
R7TU23_CAPTE	R7UHE8_CAPTE	R7TU23	R7UHE8	Uncharacterized protein.	Uncharacterized protein.	0.996
R7TU23_CAPTE	R7UXJ2_CAPTE	R7TU23	R7UXJ2	Uncharacterized protein.	DUF4206 domain-containing protein.	0.795

page 1 of 4

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About